BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007H06SP1|AL425776
(770 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1042 1497 0.0
>3x_Contig1042
Length = 3616
Score = 1497 bits (752), Expect = 0.0
Identities = 763/770 (99%)
Strand = Plus / Minus
Query: 1 atcaatctacccaatcttggagtagcacctttccagaaagtcttcaaaccttcctcbttg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1664 atcaatctacccaatcttggagtagcacctttccagaaagtcttcaaaccttcctccttg 1605
Query: 61 aaaatggtagcgaaacagttaatagtagaagaatattggcctgcattcaaagattgcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1604 aaaatggtagcgaaacagttaatagtagaagaatattggcctgcattcaaagattgcatt 1545
Query: 121 cttgtcttaacggtatcgataggcattgtcgtataaacggtaacgataccactgaaggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1544 cttgtcttaacggtatcgataggcattgtcgtataaacggtaacgataccactgaaggca 1485
Query: 181 cctacaatgaaggtcaaacctgaactcaaaggtttatccttaggtacgtttgtgtaatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1484 cctacaatgaaggtcaaacctgaactcaaaggtttatccttaggtacgtttgtgtaatct 1425
Query: 241 tgcaccaaagtcttgatcttgttataacaacccaatctaacggcttgatttgcagcttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1424 tgcaccaaagtcttgatcttgttataacaacccaatctaacggcttgatttgcagcttgt 1365
Query: 301 ctcatggaaactggtaagacacctctataaagaccagaaaatccttgatcggrtaaragc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 1364 ctcatggaaactggtaagacacctctataaagaccagaaaatccttgatcggataaaagc 1305
Query: 361 ttagcataattgctcaccatacctttcccgttattttgatattttggcacagcagcttgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1304 ttagcataattgctcaccatacctttcccgttattttgatattttggcacagcagcttgc 1245
Query: 421 ttatcatcgatcaatgcagtgttgatggcttcgaatggrgtgacagccacgaccgattcc 480
|||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 1244 ttatcatcgatcaatgcagtcttgatggcttcgaatggagtcacagccacgaccgattcc 1185
Query: 481 aacaaacctgcacctaacccggcaacaacacctctaaatccactcaactcaccggtcttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1184 aacaaacctgcacctaacccggcaacaacacctctaaatccactcaactcaccggtcttc 1125
Query: 541 ttgtctcgaagcaagttcttgattgtgtcgaacccaagaaatctaataccggcctttgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1124 ttgtctcgaagcaagttcttgattgtgtcgaacccaagaaatctaataccggcctttgct 1065
Query: 601 gtgttaccaacgatgaaagctggacaaccgacgtaaatggatgarataccgtagttctta 660
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1064 gtgttaccaacgatgaaagctggacaaccgacgtaaatggatgaaataccgtagttctta 1005
Query: 661 cccgtattgtatattagaaccaatggatttctggaagctttactagccttatccaccaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 cccgtattgtatattagaaccaatggatttctggaagctttactagccttatccaccaac 945
Query: 721 tgtaacctcgttttggcaaactcgaaaggataagtgatggaggcttctat 770
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 tgtaacctcgttttggcaaactcgaaaggataagtgatggaggcttctat 895
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4734
Number of Sequences: 1807
Number of extensions: 4734
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 770
length of database: 10,358,551
effective HSP length: 16
effective length of query: 754
effective length of database: 10,329,639
effective search space: 7788547806
effective search space used: 7788547806
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)